It will be the second meeting between the two countries in five days.
They clashed last Thursday in Cape Coast with the Black Stars winning 2-0 courtesy a brace by captain Andre Ayew.
The second match will be played in Khartoum, an advantage to the Sudanese, who are looking to get their campaign back on track after back to back defeats.
For Black Stars, a win will ensure qualification to the tournament, which will be hosted by Cameroon in 2022.
The match is expected to kickoff at 13:00 GMT.